EnhancerDB
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  3. rs539079087[chr16:85497355]
Enhancers that have rs539079087[chr16:85497355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85497347 85497685 vista23311
VISTA
Transcript factors that have rs539079087[chr16:85497355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85495350 85497605 TCF7L2 GTRD no Colon (HCT116) 108214729
chr16 85495350 85497605 TCF7L2 GTRD no Colon (HCT116) 108214730
chr16 85496692 85497482 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214742
chr16 85496692 85497482 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214743
chr16 85496929 85497453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726326
chr16 85496929 85497453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214756
chr16 85496929 85497453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214757
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 21726327
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 108214758
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 108214759
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 108214760
chr16 85497111 85497455 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726328
chr16 85497111 85497455 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214761
chr16 85497111 85497455 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214762
chr16 85497134 85497658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726329
chr16 85497134 85497658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214763
chr16 85497134 85497658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214764
chr16 85497167 85497633 TCF7L2 GTRD no Colon (HCT116) 108214765
chr16 85497167 85497633 TCF7L2 GTRD no Colon (HCT116) 108214766
chr16 85497333 85498279 ZNF274 GTRD no Bone Marrow (K562) 21726330
chr16 85497333 85498279 ZNF274 GTRD no Bone Marrow (K562) 108214767
chr16 85497343 85497358 NR2C2 JASPAR yes 12064680
chr16 85497343 85497358 NR2C2 JASPAR yes 49408509
Genes associated with rs539079087[chr16:85497355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More