EnhancerDB
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  3. rs539121237[chr17:27468977]
Enhancers that have rs539121237[chr17:27468977]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539121237[chr17:27468977]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27466164 27468989 ZNF274 GTRD no Bone Marrow (K562) 21748766
chr17 27466164 27468989 ZNF274 GTRD no Bone Marrow (K562) 108246443
chr17 27466191 27469715 ZNF274 GTRD no Blood (GM12878) 21748769
chr17 27466191 27469715 ZNF274 GTRD no Blood (GM12878) 108246446
chr17 27468959 27468979 RREB1 JASPAR yes 53716599
chr17 27468959 27468980 IRF1 JASPAR yes 53716600
chr17 27468960 27468981 IRF1 JASPAR yes 53716603
chr17 27468966 27468981 FOXP1 JASPAR yes 53716607
chr17 27468967 27468978 FOXP2 JASPAR yes 53716608
chr17 27468967 27468979 FOXC2 JASPAR yes 53716609
Genes associated with rs539121237[chr17:27468977], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More