EnhancerDB
  1. Home
  2. SNP
  3. rs539138141[chr1:209605389]
Enhancers that have rs539138141[chr1:209605389]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs539138141[chr1:209605389]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209605381 209605397 T JASPAR yes 34975532
chr1 209605388 209605398 TBX21 JASPAR yes 34975533
chr1 209605388 209605401 EOMES JASPAR yes 34975534
Genes associated with rs539138141[chr1:209605389], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More