EnhancerDB
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  3. rs539174415[chr5:172452146]
Enhancers that have rs539174415[chr5:172452146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172449605 172459855 enh22819
Bone Marrow (K562) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Adrenal Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs539174415[chr5:172452146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172452136 172452157 IRF1 JASPAR yes 67849526
chr5 172452140 172452161 IRF1 JASPAR yes 67849527
chr5 172452141 172452162 IRF1 JASPAR yes 67849528
chr5 172452142 172452163 IRF1 JASPAR yes 67849529
chr5 172452143 172452158 FOXP1 JASPAR yes 67849530
chr5 172452143 172452164 IRF1 JASPAR yes 67849531
chr5 172452144 172452165 IRF1 JASPAR yes 67849532
chr5 172452145 172452160 FOXP1 JASPAR yes 67849533
chr5 172452145 172452166 IRF1 JASPAR yes 67849534
chr5 172452146 172452161 FOXP1 JASPAR yes 67849535
chr5 172452146 172452167 IRF1 JASPAR yes 67849536
Genes associated with rs539174415[chr5:172452146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More