EnhancerDB
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  3. rs539180026[chr19:3343173]
Enhancers that have rs539180026[chr19:3343173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs539180026[chr19:3343173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3342492 3344610 TEF1 GTRD no Bone (Osteoblast) 21838735
chr19 3342492 3344610 TEF1 GTRD no Bone (Osteoblast) 108365483
chr19 3343159 3343178 PAX5 JASPAR yes 112121552
chr19 3343162 3343179 PAX1 JASPAR yes 112121553
chr19 3343162 3343179 PAX9 JASPAR yes 112121554
Genes associated with rs539180026[chr19:3343173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More