EnhancerDB
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  3. rs539187847[chr12:109163223]
Enhancers that have rs539187847[chr12:109163223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109156825 109170435 enh14976
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs539187847[chr12:109163223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109163206 109163225 REST JASPAR yes 123620687
chr12 109163209 109163223 STAT1 JASPAR yes 123620688
chr12 109163212 109163232 RREB1 JASPAR yes 123620689
chr12 109163213 109163234 IRF1 JASPAR yes 123620690
chr12 109163217 109163229 IRF1 JASPAR yes 123620691
chr12 109163217 109163237 RREB1 JASPAR yes 123620692
chr12 109163218 109163239 IRF1 JASPAR yes 123620693
chr12 109163219 109163225 TCF4 TRANSFAC yes 123620694
chr12 109163219 109163234 FOXP1 JASPAR yes 123620695
chr12 109163222 109163234 IRF1 JASPAR yes 123620696
Genes associated with rs539187847[chr12:109163223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More