EnhancerDB
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  3. rs539198579[chr1:12205223]
Enhancers that have rs539198579[chr1:12205223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs539198579[chr1:12205223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12205216 12205231 RUNX2 JASPAR yes 26803023
chr1 12205218 12205233 RFX5 JASPAR yes 26803024
chr1 12205222 12205237 RUNX2 JASPAR yes 26803025
Genes associated with rs539198579[chr1:12205223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More