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- rs539200189[chr14:60648027]
Enhancers that have rs539200189[chr14:60648027]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr14 |
60644088 |
60657115 |
enh3230 |
|
|
Transcript factors that have rs539200189[chr14:60648027]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr14
|
60647626
|
60649970
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21621362
|
|
|
chr14
|
60647664
|
60648138
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21621363
|
|
|
chr14
|
60647943
|
60650132
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21621364
|
|
|
chr14
|
60648000
|
60649658
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21621365
|
|
|
chr14
|
60648017
|
60648032
|
SOX21
|
JASPAR
|
yes
|
|
115767305
|
|
|
chr14
|
60648017
|
60648033
|
SOX4
|
JASPAR
|
yes
|
|
115767306
|
|
|
chr14
|
60648019
|
60648030
|
PHOX2A
|
JASPAR
|
yes
|
|
115767307
|
|
|
chr14
|
60648019
|
60648030
|
PROP1
|
JASPAR
|
yes
|
|
115767308
|
|
Genes associated with rs539200189[chr14:60648027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |