EnhancerDB
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  3. rs539202102[chr11:12772113]
Enhancers that have rs539202102[chr11:12772113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12762585 12780675 enh28602
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539202102[chr11:12772113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12771195 12772849 ZBTB33 GTRD no Brain (SK-N-SH) 21471832
chr11 12771195 12772849 ZBTB33 GTRD no Brain (SK-N-SH) 107959341
chr11 12771503 12772887 ZBTB33 GTRD no Brain (SK-N-SH) 21471833
chr11 12771503 12772887 ZBTB33 GTRD no Brain (SK-N-SH) 107959342
chr11 12772100 12772113 SMAD2 JASPAR yes 37472341
chr11 12772105 12772116 SMAD4 TRANSFAC yes 37472342
Genes associated with rs539202102[chr11:12772113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More