EnhancerDB
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  3. rs539204410[chr12:49595575]
Enhancers that have rs539204410[chr12:49595575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49590445 49597955 enh2325
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
Transcript factors that have rs539204410[chr12:49595575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49595001 49595651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21544441
chr12 49595001 49595651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108029821
chr12 49595005 49595649 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108029822
chr12 49595072 49595608 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108029827
chr12 49595273 49595809 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108029843
chr12 49595562 49595583 ZNF263 JASPAR yes 120763735
chr12 49595571 49595575 YY1 TRANSFAC yes 120763737
Genes associated with rs539204410[chr12:49595575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More