EnhancerDB
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  3. rs539206162[chr1:203289040]
Enhancers that have rs539206162[chr1:203289040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539206162[chr1:203289040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203285704 203292159 ZNF274 GTRD no Blood (GM12878) 21368276
chr1 203285704 203292159 ZNF274 GTRD no Blood (GM12878) 107858484
chr1 203285725 203292196 ZNF274 GTRD no Blood (GM12878) 21368277
chr1 203285725 203292196 ZNF274 GTRD no Blood (GM12878) 107858485
chr1 203285967 203292656 ZNF274 GTRD no Blood (GM12878) 21368283
chr1 203285967 203292656 ZNF274 GTRD no Blood (GM12878) 107858486
chr1 203286011 203291736 ZNF274 GTRD no Blood (GM12878) 21368289
chr1 203286011 203291736 ZNF274 GTRD no Blood (GM12878) 107858487
chr1 203286069 203291868 STAT3 GTRD no Blood (OCI-LY7) 21368295
chr1 203286069 203291868 STAT3 GTRD no Blood (OCI-LY7) 107858488
chr1 203286095 203292070 ZNF274 GTRD no Blood (GM12878) 21368299
chr1 203286095 203292070 ZNF274 GTRD no Blood (GM12878) 107858489
chr1 203286121 203292024 ZNF274 GTRD no Blood (GM12878) 21368301
chr1 203286121 203292024 ZNF274 GTRD no Blood (GM12878) 107858490
chr1 203286144 203289817 ZNF274 GTRD no Bone Marrow (K562) 21368305
chr1 203286284 203291886 ZNF274 GTRD no Blood (GM12878) 21368311
chr1 203286284 203291886 ZNF274 GTRD no Blood (GM12878) 107858491
chr1 203288179 203291629 ZNF274 GTRD no Blood (GM12878) 21368393
chr1 203288179 203291629 ZNF274 GTRD no Blood (GM12878) 107858492
chr1 203288841 203291904 ZNF274 GTRD no Blood (GM12878) 21368396
chr1 203288841 203291904 ZNF274 GTRD no Blood (GM12878) 107858493
chr1 203288891 203292285 ZNF274 GTRD no Bone Marrow (K562) 21368397
chr1 203288891 203292285 ZNF274 GTRD no Bone Marrow (K562) 107858494
chr1 203288893 203290923 ZNF274 GTRD no Blood (GM12878) 21368398
chr1 203288893 203290923 ZNF274 GTRD no Blood (GM12878) 107858495
chr1 203288910 203290433 ZNF274 GTRD no Blood (GM12878) 21368399
chr1 203288910 203290433 ZNF274 GTRD no Blood (GM12878) 107858496
chr1 203288961 203291114 ZNF274 GTRD no Blood (GM12878) 21368400
chr1 203288961 203291114 ZNF274 GTRD no Blood (GM12878) 107858497
chr1 203288978 203291039 ZNF274 GTRD no Blood (GM12878) 21368401
chr1 203288978 203291039 ZNF274 GTRD no Blood (GM12878) 107858498
chr1 203288997 203291942 ZNF274 GTRD no Bone Marrow (K562) 21368402
chr1 203288997 203291942 ZNF274 GTRD no Bone Marrow (K562) 107858499
chr1 203289002 203290058 ZNF274 GTRD no Bone Marrow (K562) 21368403
chr1 203289002 203290058 ZNF274 GTRD no Bone Marrow (K562) 107858500
chr1 203289006 203290921 ZNF274 GTRD no Blood (GM12878) 21368404
chr1 203289006 203290921 ZNF274 GTRD no Blood (GM12878) 107858501
chr1 203289025 203291126 ZNF274 GTRD no Blood (GM12878) 21368405
chr1 203289025 203291126 ZNF274 GTRD no Blood (GM12878) 107858502
chr1 203289030 203291765 ZNF274 GTRD no Blood (GM12878) 21368406
chr1 203289030 203291765 ZNF274 GTRD no Blood (GM12878) 107858503
chr1 203289030 203292168 ZNF274 GTRD no Bone Marrow (K562) 21368407
chr1 203289030 203292168 ZNF274 GTRD no Bone Marrow (K562) 107858504
Genes associated with rs539206162[chr1:203289040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More