EnhancerDB
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  3. rs539243153[chr1:108487117]
Enhancers that have rs539243153[chr1:108487117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs539243153[chr1:108487117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108487114 108487120 LEF1 TRANSFAC yes 31371748
chr1 108487114 108487120 SOX10 JASPAR yes 31371749
Genes associated with rs539243153[chr1:108487117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More