EnhancerDB
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  3. rs539305390[chr12:104964942]
Enhancers that have rs539305390[chr12:104964942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs539305390[chr12:104964942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104964936 104964957 IRF1 JASPAR yes 123392495
chr12 104964937 104964958 IRF1 JASPAR yes 123392496
chr12 104964941 104964956 FOXP1 JASPAR yes 123392497
chr12 104964942 104964957 FOXP1 JASPAR yes 123392498
Genes associated with rs539305390[chr12:104964942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More