EnhancerDB
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  3. rs539339947[chr1:203288471]
Enhancers that have rs539339947[chr1:203288471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539339947[chr1:203288471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203285704 203292159 ZNF274 GTRD no Blood (GM12878) 21368276
chr1 203285704 203292159 ZNF274 GTRD no Blood (GM12878) 107858484
chr1 203285725 203292196 ZNF274 GTRD no Blood (GM12878) 21368277
chr1 203285725 203292196 ZNF274 GTRD no Blood (GM12878) 107858485
chr1 203285799 203288630 ZNF274 GTRD no Bone Marrow (K562) 21368279
chr1 203285939 203288737 ZNF274 GTRD no Blood (GM12878) 21368282
chr1 203285967 203292656 ZNF274 GTRD no Blood (GM12878) 21368283
chr1 203285967 203292656 ZNF274 GTRD no Blood (GM12878) 107858486
chr1 203286011 203291736 ZNF274 GTRD no Blood (GM12878) 21368289
chr1 203286011 203291736 ZNF274 GTRD no Blood (GM12878) 107858487
chr1 203286069 203291868 STAT3 GTRD no Blood (OCI-LY7) 21368295
chr1 203286069 203291868 STAT3 GTRD no Blood (OCI-LY7) 107858488
chr1 203286095 203292070 ZNF274 GTRD no Blood (GM12878) 21368299
chr1 203286095 203292070 ZNF274 GTRD no Blood (GM12878) 107858489
chr1 203286121 203292024 ZNF274 GTRD no Blood (GM12878) 21368301
chr1 203286121 203292024 ZNF274 GTRD no Blood (GM12878) 107858490
chr1 203286144 203289817 ZNF274 GTRD no Bone Marrow (K562) 21368305
chr1 203286262 203288514 ZNF274 GTRD no Cervix (HeLa-S3) 21368309
chr1 203286284 203291886 ZNF274 GTRD no Blood (GM12878) 21368311
chr1 203286284 203291886 ZNF274 GTRD no Blood (GM12878) 107858491
chr1 203286605 203288623 ZNF274 GTRD no Bone Marrow (K562) 21368320
chr1 203286661 203288708 ZNF274 GTRD no Bone Marrow (K562) 21368325
chr1 203286755 203288758 ZNF274 GTRD no Bone Marrow (K562) 21368330
chr1 203287087 203288608 ZNF274 GTRD no Bone Marrow (K562) 21368359
chr1 203287110 203288826 ZNF274 GTRD no Blood (GM12878) 21368362
chr1 203288179 203291629 ZNF274 GTRD no Blood (GM12878) 21368393
chr1 203288179 203291629 ZNF274 GTRD no Blood (GM12878) 107858492
chr1 203288321 203288697 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21368394
Genes associated with rs539339947[chr1:203288471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More