EnhancerDB
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  3. rs539355220[chr2:227483159]
Enhancers that have rs539355220[chr2:227483159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227470185 227504834 enh19282
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs539355220[chr2:227483159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227483157 227483169 PKNOX1 JASPAR yes 81474011
chr2 227483157 227483169 TGIF1 JASPAR yes 81474012
chr2 227483157 227483169 TGIF2 JASPAR yes 81474013
Genes associated with rs539355220[chr2:227483159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More