EnhancerDB
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  3. rs539358682[chr1:52008285]
Enhancers that have rs539358682[chr1:52008285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs539358682[chr1:52008285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52008276 52008286 EMX1 JASPAR yes 28848026
chr1 52008276 52008286 EVX1 JASPAR yes 28848027
chr1 52008276 52008286 EVX2 JASPAR yes 28848028
chr1 52008276 52008286 HOXA2 JASPAR yes 28848029
chr1 52008276 52008286 MEOX1 JASPAR yes 28848030
chr1 52008276 52008286 MEOX2 JASPAR yes 28848031
chr1 52008278 52008290 POU3F1 JASPAR yes 28848032
chr1 52008278 52008290 POU3F2 JASPAR yes 28848033
chr1 52008284 52008294 MAX JASPAR yes 28848034
Genes associated with rs539358682[chr1:52008285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More