EnhancerDB
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  3. rs539360939[chr16:29302879]
Enhancers that have rs539360939[chr16:29302879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs539360939[chr16:29302879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29302209 29303417 ZNF274 GTRD no Bone Marrow (K562) 21702186
chr16 29302354 29303012 ZNF274 GTRD no Bone Marrow (K562) 21702204
chr16 29302380 29302948 ZNF274 GTRD no Bone Marrow (K562) 21702206
chr16 29302397 29302934 ZNF274 GTRD no Bone Marrow (K562) 21702208
chr16 29302408 29302934 ZNF274 GTRD no Bone Marrow (K562) 21702210
chr16 29302410 29302937 ZNF274 GTRD no Bone Marrow (K562) 21702211
chr16 29302411 29302932 ZNF274 GTRD no Bone Marrow (K562) 21702212
chr16 29302419 29302947 ZNF274 GTRD no Bone Marrow (K562) 21702214
chr16 29302511 29303861 ZNF274 GTRD no Bone Marrow (K562) 21702216
chr16 29302876 29302891 RFX5 JASPAR yes 10258225
Genes associated with rs539360939[chr16:29302879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More