EnhancerDB
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  3. rs539364229[chr1:16445180]
Enhancers that have rs539364229[chr1:16445180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs539364229[chr1:16445180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16445171 16445188 RXRA JASPAR yes 27026679
chr1 16445179 16445193 PLAG1 JASPAR yes 27026681
Genes associated with rs539364229[chr1:16445180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More