EnhancerDB
  1. Home
  2. SNP
  3. rs539366127[chr1:205643017]
Enhancers that have rs539366127[chr1:205643017]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs539366127[chr1:205643017]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205643015 205643030 TFAP2C JASPAR yes 34778429
chr1 205643017 205643029 TFAP2A JASPAR yes 34778430
chr1 205643017 205643029 TFAP2B JASPAR yes 34778431
chr1 205643017 205643029 TFAP2C JASPAR yes 34778432
chr1 205643017 205643032 TFAP2A JASPAR yes 34778433
chr1 205643017 205643032 TFAP2C JASPAR yes 34778434
Genes associated with rs539366127[chr1:205643017], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More