EnhancerDB
  1. Home
  2. SNP
  3. rs539422881[chr1:54144000]
Enhancers that have rs539422881[chr1:54144000]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54142285 54153175 enh26712
Brain (SK-N-SH) Large Intestine Astrocyte Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs539422881[chr1:54144000]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54143916 54144986 ZNF143 GTRD no Epithelial (MCF-7) 107804213
chr1 54143983 54144004 ZNF263 JASPAR yes 28945804
chr1 54143986 54144007 ZNF263 JASPAR yes 28945805
chr1 54143988 54144008 RREB1 JASPAR yes 28945806
chr1 54143992 54144012 RREB1 JASPAR yes 28945807
chr1 54143992 54144013 ZNF263 JASPAR yes 28945808
chr1 54143993 54144007 PLAG1 JASPAR yes 28945809
chr1 54143993 54144008 NR2C2 JASPAR yes 28945810
chr1 54143993 54144014 ZNF263 JASPAR yes 28945811
chr1 54143995 54144005 SP1 JASPAR yes 28945812
chr1 54143995 54144015 RREB1 JASPAR yes 28945813
chr1 54143995 54144016 ZNF263 JASPAR yes 28945814
chr1 54143996 54144016 RREB1 JASPAR yes 28945815
chr1 54143997 54144007 ZNF740 JASPAR yes 28945816
chr1 54143997 54144017 RREB1 JASPAR yes 28945817
chr1 54143998 54144018 RREB1 JASPAR yes 28945818
chr1 54143998 54144019 ZNF263 JASPAR yes 28945819
chr1 54143999 54144009 SP1 JASPAR yes 28945820
chr1 54143999 54144009 ZNF740 JASPAR yes 28945821
chr1 54143999 54144019 RREB1 JASPAR yes 28945822
chr1 54144000 54144010 SP1 JASPAR yes 28945823
chr1 54144000 54144010 ZNF740 JASPAR yes 28945824
chr1 54144000 54144020 RREB1 JASPAR yes 28945825
Genes associated with rs539422881[chr1:54144000], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More