EnhancerDB
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  3. rs539433792[chr6:110865004]
Enhancers that have rs539433792[chr6:110865004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539433792[chr6:110865004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110864995 110865009 MTF1 JASPAR yes 104296289
chr6 110864995 110865010 RUNX2 JASPAR yes 104296290
chr6 110864998 110865010 GLI2 JASPAR yes 104296291
chr6 110865004 110865008 ESR1 TRANSFAC yes 104296292
Genes associated with rs539433792[chr6:110865004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More