EnhancerDB
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  3. rs539446056[chr19:6253139]
Enhancers that have rs539446056[chr19:6253139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6230503 6255735 enh4983
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs539446056[chr19:6253139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6253131 6253147 ZNF143 JASPAR yes 112264803
chr19 6253132 6253141 ZEB1 JASPAR yes 112264804
chr19 6253139 6253144 SP1 TRANSFAC yes 112264805
chr19 6253139 6253148 HIC2 JASPAR yes 112264806
Genes associated with rs539446056[chr19:6253139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More