EnhancerDB
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  3. rs539465622[chr17:76956006]
Enhancers that have rs539465622[chr17:76956006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs539465622[chr17:76956006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76955205 76956855 TCF7L2 GTRD no Colon (HCT116) 21795531
chr17 76955789 76957414 TCF7L2 GTRD no Colon (HCT116) 21795533
chr17 76955800 76956768 TCF7L2 GTRD no Colon (HCT116) 21795534
chr17 76955983 76956273 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21795535
chr17 76955989 76956259 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21795536
chr17 76956000 76956014 TLX1 JASPAR yes 56193793
Genes associated with rs539465622[chr17:76956006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More