EnhancerDB
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  3. rs539465787[chr1:235454729]
Enhancers that have rs539465787[chr1:235454729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235448657 235464435 enh12801
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs539465787[chr1:235454729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235454724 235454740 POU4F2 JASPAR yes 36361232
chr1 235454724 235454740 POU4F3 JASPAR yes 36361233
chr1 235454726 235454737 CDX2 JASPAR yes 36361234
chr1 235454726 235454740 ONECUT2 JASPAR yes 36361235
chr1 235454726 235454740 ONECUT3 JASPAR yes 36361236
chr1 235454728 235454740 FOXC2 JASPAR yes 36361237
Genes associated with rs539465787[chr1:235454729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More