EnhancerDB
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  3. rs539490488[chr16:85486339]
Enhancers that have rs539490488[chr16:85486339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539490488[chr16:85486339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85484406 85487529 ZNF143 GTRD no Epithelial (MCF-7) 21726085
chr16 85484435 85486918 ZNF143 GTRD no Epithelial (MCF-7) 21726086
chr16 85484462 85486895 ZNF143 GTRD no Epithelial (MCF-7) 21726088
chr16 85485708 85486809 ZNF143 GTRD no Epithelial (MCF-7) 21726091
chr16 85485875 85486911 ZNF143 GTRD no Epithelial (MCF-7) 21726092
chr16 85486253 85486423 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726093
chr16 85486327 85486348 REST JASPAR yes 12063037
chr16 85486328 85486347 REST JASPAR yes 12063038
Genes associated with rs539490488[chr16:85486339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More