EnhancerDB
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  3. rs539491739[chr15:40341528]
Enhancers that have rs539491739[chr15:40341528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539491739[chr15:40341528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40339850 40341567 ZBTB33 GTRD no Brain (SK-N-SH) 21649320
chr15 40339850 40341567 ZBTB33 GTRD no Brain (SK-N-SH) 108133564
chr15 40339850 40341567 ZBTB33 GTRD no Brain (SK-N-SH) 108133565
chr15 40339850 40341567 ZBTB33 GTRD no Brain (SK-N-SH) 108133566
chr15 40340195 40341770 ZNF274 GTRD no Bone Marrow (K562) 108133641
chr15 40340195 40341770 ZNF274 GTRD no Bone Marrow (K562) 108133642
chr15 40340195 40341770 ZNF274 GTRD no Bone Marrow (K562) 108133643
chr15 40341528 40341533 TFAP2A TRANSFAC yes 22922985
chr15 40341528 40341534 MZF1 JASPAR yes 22922986
Genes associated with rs539491739[chr15:40341528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More