EnhancerDB
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  3. rs539494601[chr1:201563659]
Enhancers that have rs539494601[chr1:201563659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs539494601[chr1:201563659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201561094 201563864 ZBTB33 GTRD no Brain (SK-N-SH) 21365074
chr1 201562184 201563691 ZBTB33 GTRD no Brain (SK-N-SH) 21365094
chr1 201563059 201564428 ZNF143 GTRD no Epithelial (MCF-7) 21365131
chr1 201563599 201564259 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365132
chr1 201563606 201564136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365133
chr1 201563614 201564130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365134
Genes associated with rs539494601[chr1:201563659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More