EnhancerDB
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  3. rs539513977[chr17:42623750]
Enhancers that have rs539513977[chr17:42623750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
Transcript factors that have rs539513977[chr17:42623750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42622963 42624862 ZBTB33 GTRD no Lung (A549) 107688164
chr17 42622963 42624862 ZBTB33 GTRD no Lung (A549) 108263058
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 21762453
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 107688165
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 108263059
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 21762454
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 107688166
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 108263060
chr17 42623233 42624893 ZNF274 GTRD no Bone Marrow (K562) 21762455
chr17 42623233 42624893 ZNF274 GTRD no Bone Marrow (K562) 107688167
chr17 42623233 42624893 ZNF274 GTRD no Bone Marrow (K562) 108263061
chr17 42623258 42623796 ZNF274 GTRD no Bone Marrow (K562) 21762456
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 21762458
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 107688168
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 108263062
chr17 42623381 42624934 ZBTB33 GTRD no Lung (A549) 107688169
chr17 42623381 42624934 ZBTB33 GTRD no Lung (A549) 108263063
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 21762459
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 107688170
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263064
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263065
chr17 42623685 42624875 ZBTB33 GTRD no Lung (A549) 107688171
chr17 42623685 42624875 ZBTB33 GTRD no Lung (A549) 108263066
chr17 42623708 42624759 P63 GTRD no Skin (Keratinocyte) 21762460
chr17 42623708 42624759 P63 GTRD no Skin (Keratinocyte) 108263067
chr17 42623713 42624729 ZNF274 GTRD no Bone Marrow (K562) 21762461
chr17 42623713 42624729 ZNF274 GTRD no Bone Marrow (K562) 108263068
chr17 42623722 42624894 ZNF274 GTRD no Bone Marrow (K562) 21762462
chr17 42623722 42624894 ZNF274 GTRD no Bone Marrow (K562) 107688172
chr17 42623722 42624894 ZNF274 GTRD no Bone Marrow (K562) 108263069
chr17 42623728 42624820 ZBTB33 GTRD no Lung (A549) 107688173
chr17 42623728 42624820 ZBTB33 GTRD no Lung (A549) 108263070
chr17 42623729 42623750 IRF1 JASPAR yes 54406032
chr17 42623749 42624850 ZNF274 GTRD no Cervix (HeLa-S3) 21762463
chr17 42623749 42624850 ZNF274 GTRD no Cervix (HeLa-S3) 107688174
chr17 42623749 42624850 ZNF274 GTRD no Cervix (HeLa-S3) 108263071
Genes associated with rs539513977[chr17:42623750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More