EnhancerDB
  1. Home
  2. SNP
  3. rs539528096[chr16:28200125]
Enhancers that have rs539528096[chr16:28200125]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs539528096[chr16:28200125]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28200121 28200125 NFE TRANSFAC yes 10220710
chr16 28200122 28200127 GATA2 JASPAR yes 10220711
chr16 28200123 28200133 MZF1 JASPAR yes 10220712
Genes associated with rs539528096[chr16:28200125], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More