-
Home
- SNP
- rs539539150[chr17:79002545]
Enhancers that have rs539539150[chr17:79002545]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
78989925 |
79003875 |
enh17432 |
|
|
Transcript factors that have rs539539150[chr17:79002545]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
79002288
|
79003160
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797510
|
|
|
chr17
|
79002531
|
79002545
|
GLIS2
|
JASPAR
|
yes
|
|
56298913
|
|
|
chr17
|
79002531
|
79002545
|
GLIS3
|
JASPAR
|
yes
|
|
56298914
|
|
|
chr17
|
79002535
|
79002545
|
ZNF740
|
JASPAR
|
yes
|
|
56298916
|
|
|
chr17
|
79002538
|
79002545
|
SP1
|
TRANSFAC
|
yes
|
|
56298917
|
|
|
chr17
|
79002538
|
79002548
|
SP1
|
JASPAR
|
yes
|
|
56298918
|
|
|
chr17
|
79002539
|
79002547
|
SP1
|
TRANSFAC
|
yes
|
|
56298919
|
|
|
chr17
|
79002540
|
79002545
|
SP1
|
TRANSFAC
|
yes
|
|
56298920
|
|
|
chr17
|
79002541
|
79002546
|
SP1
|
TRANSFAC
|
yes
|
|
56298921
|
|
Genes associated with rs539539150[chr17:79002545], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |