EnhancerDB
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  3. rs539547412[chr17:80248451]
Enhancers that have rs539547412[chr17:80248451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs539547412[chr17:80248451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80247341 80249571 TCF7L2 GTRD no Colon (HCT116) 21798690
chr17 80247367 80249648 TCF7L2 GTRD no Colon (HCT116) 21798691
chr17 80247512 80249378 TCF7L2 GTRD no Colon (HCT116) 21798692
chr17 80247516 80249647 ZNF143 GTRD no Epithelial (MCF-7) 21798693
chr17 80247525 80249658 TCF7L2 GTRD no Colon (HCT116) 21798694
chr17 80247976 80248472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798700
chr17 80247979 80248495 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798701
chr17 80248008 80248464 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798706
chr17 80248013 80248453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798707
chr17 80248039 80248615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798710
chr17 80248089 80248465 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798718
chr17 80248120 80248480 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798721
chr17 80248139 80248475 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798725
chr17 80248154 80248454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798726
chr17 80248154 80248504 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798727
chr17 80248197 80248461 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798730
chr17 80248209 80248665 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798732
chr17 80248230 80248694 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21798736
chr17 80248451 80248455 ESR1 TRANSFAC yes 56358499
Genes associated with rs539547412[chr17:80248451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More