EnhancerDB
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  3. rs539559680[chr1:19829874]
Enhancers that have rs539559680[chr1:19829874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19829385 19843275 enh100
Large Intestine Ovary Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Placenta Blood (Karpas-422) Muscle (Myotube) Uterus Heart
Transcript factors that have rs539559680[chr1:19829874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19829856 19829877 IRF1 JASPAR yes 27197845
chr1 19829857 19829878 IRF1 JASPAR yes 27197847
chr1 19829858 19829879 IRF1 JASPAR yes 27197849
chr1 19829859 19829874 FOXP1 JASPAR yes 27197850
chr1 19829859 19829880 IRF1 JASPAR yes 27197851
chr1 19829860 19829875 FOXP1 JASPAR yes 27197852
chr1 19829860 19829881 IRF1 JASPAR yes 27197853
chr1 19829861 19829876 FOXP1 JASPAR yes 27197854
chr1 19829861 19829882 IRF1 JASPAR yes 27197855
chr1 19829862 19829877 FOXP1 JASPAR yes 27197856
chr1 19829862 19829883 IRF1 JASPAR yes 27197857
chr1 19829863 19829878 FOXP1 JASPAR yes 27197858
chr1 19829863 19829884 IRF1 JASPAR yes 27197859
chr1 19829864 19829879 FOXP1 JASPAR yes 27197860
chr1 19829864 19829885 IRF1 JASPAR yes 27197861
chr1 19829865 19829880 FOXP1 JASPAR yes 27197862
chr1 19829865 19829886 IRF1 JASPAR yes 27197863
chr1 19829866 19829881 FOXP1 JASPAR yes 27197864
chr1 19829866 19829887 IRF1 JASPAR yes 27197865
chr1 19829867 19829882 FOXP1 JASPAR yes 27197866
chr1 19829867 19829888 IRF1 JASPAR yes 27197867
chr1 19829868 19829883 FOXP1 JASPAR yes 27197868
chr1 19829868 19829889 IRF1 JASPAR yes 27197869
chr1 19829869 19829884 FOXP1 JASPAR yes 27197870
chr1 19829869 19829890 IRF1 JASPAR yes 27197871
chr1 19829870 19829885 FOXP1 JASPAR yes 27197872
chr1 19829870 19829891 IRF1 JASPAR yes 27197873
chr1 19829871 19829886 FOXP1 JASPAR yes 27197874
chr1 19829871 19829892 IRF1 JASPAR yes 27197875
chr1 19829872 19829887 FOXP1 JASPAR yes 27197876
chr1 19829872 19829893 IRF1 JASPAR yes 27197877
chr1 19829873 19829888 FOXP1 JASPAR yes 27197878
chr1 19829873 19829894 IRF1 JASPAR yes 27197879
chr1 19829874 19829889 FOXP1 JASPAR yes 27197880
chr1 19829874 19829895 IRF1 JASPAR yes 27197881
Genes associated with rs539559680[chr1:19829874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More