EnhancerDB
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  3. rs539572082[chr1:12646953]
Enhancers that have rs539572082[chr1:12646953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs539572082[chr1:12646953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12646942 12646953 NFKB1 JASPAR yes 26835681
chr1 12646943 12646953 NFKB1 JASPAR yes 26835682
chr1 12646946 12646954 FEV JASPAR yes 26835684
chr1 12646947 12646961 EBF1 JASPAR yes 26835685
Genes associated with rs539572082[chr1:12646953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More