EnhancerDB
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  3. rs539577065[chr16:17497961]
Enhancers that have rs539577065[chr16:17497961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17497005 17513795 enh3924
Brain (SK-N-SH) Ovary Astrocyte Bone (Osteoblast) Blood (GM12878) Peripheral Blood (MM.1S) Adrenal Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs539577065[chr16:17497961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17497942 17497962 RREB1 JASPAR yes 9806290
chr16 17497945 17497965 RREB1 JASPAR yes 9806292
chr16 17497946 17497966 RREB1 JASPAR yes 9806293
chr16 17497947 17497967 RREB1 JASPAR yes 9806294
chr16 17497949 17497963 PLAG1 JASPAR yes 9806296
chr16 17497954 17497964 ZNF740 JASPAR yes 9806297
chr16 17497955 17497965 ZNF740 JASPAR yes 9806298
chr16 17497956 17497966 SP1 JASPAR yes 9806299
chr16 17497956 17497966 ZNF740 JASPAR yes 9806300
chr16 17497957 17497967 SP1 JASPAR yes 9806301
chr16 17497957 17497967 ZNF740 JASPAR yes 9806302
chr16 17497958 17497968 ZNF740 JASPAR yes 9806303
chr16 17497961 17497975 PLAG1 JASPAR yes 9806304
Genes associated with rs539577065[chr16:17497961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More