EnhancerDB
  1. Home
  2. SNP
  3. rs539592690[chr7:1552966]
Enhancers that have rs539592690[chr7:1552966]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 1546890 1565055 enh23920
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs539592690[chr7:1552966]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 1552734 1553491 POLR2A UCSC Txn Factor no Conserved 108542940
chr7 1552948 1552967 REST JASPAR yes 12470814
chr7 1552955 1552976 REST JASPAR yes 12470816
Genes associated with rs539592690[chr7:1552966], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More