EnhancerDB
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  3. rs539600844[chr17:72565459]
Enhancers that have rs539600844[chr17:72565459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 72560329 72568186 enh17368
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Pancreas Spleen Muscle (Myotube) Thymus Stomach
chr17 72565404 72566131 vista25916
VISTA
Transcript factors that have rs539600844[chr17:72565459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 72565165 72565521 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108291933
chr17 72565201 72565585 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108291934
chr17 72565201 72566304 POLR2A UCSC Txn Factor no Conserved 108291935
chr17 72565440 72566705 TCF7L2 GTRD no Colon (HCT116) 108291936
chr17 72565448 72565468 RREB1 JASPAR yes 21292956
chr17 72565448 72565468 RREB1 JASPAR yes 55915357
chr17 72565450 72565465 RUNX2 JASPAR yes 21292957
chr17 72565450 72565465 RUNX2 JASPAR yes 55915358
chr17 72565451 72565471 RREB1 JASPAR yes 21292958
chr17 72565451 72565471 RREB1 JASPAR yes 55915359
chr17 72565453 72565473 RREB1 JASPAR yes 21292959
chr17 72565453 72565473 RREB1 JASPAR yes 55915360
chr17 72565455 72565475 RREB1 JASPAR yes 21292960
chr17 72565455 72565475 RREB1 JASPAR yes 55915361
chr17 72565456 72565476 RREB1 JASPAR yes 21292961
chr17 72565456 72565476 RREB1 JASPAR yes 55915362
chr17 72565457 72565472 RUNX2 JASPAR yes 21292962
chr17 72565457 72565472 RUNX2 JASPAR yes 55915363
chr17 72565459 72565479 RREB1 JASPAR yes 21292963
chr17 72565459 72565479 RREB1 JASPAR yes 55915364
Genes associated with rs539600844[chr17:72565459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More