EnhancerDB
  1. Home
  2. SNP
  3. rs539638492[chr2:224735056]
Enhancers that have rs539638492[chr2:224735056]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224709233 224738255 enh19264
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Stomach
Transcript factors that have rs539638492[chr2:224735056]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224735048 224735063 HNF4A JASPAR yes 81296962
chr2 224735049 224735064 HNF4G JASPAR yes 81296963
chr2 224735055 224735059 NFE TRANSFAC yes 81296964
chr2 224735055 224735068 SMAD2 JASPAR yes 81296965
Genes associated with rs539638492[chr2:224735056], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More