EnhancerDB
  1. Home
  2. SNP
  3. rs539641407[chr19:3375487]
Enhancers that have rs539641407[chr19:3375487]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539641407[chr19:3375487]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3375480 3375492 INSM1 JASPAR yes 112124959
chr19 3375485 3375495 SP1 JASPAR yes 112124960
chr19 3375486 3375490 LFA1 TRANSFAC yes 112124961
Genes associated with rs539641407[chr19:3375487], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More