EnhancerDB
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  3. rs539662919[chr12:105138663]
Enhancers that have rs539662919[chr12:105138663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105125485 105139216 enh14950
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs539662919[chr12:105138663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105138648 105138664 POU4F2 JASPAR yes 123413987
chr12 105138648 105138664 POU4F3 JASPAR yes 123413988
chr12 105138649 105138664 FOXA1 JASPAR yes 123413990
chr12 105138650 105138664 POU4F1 JASPAR yes 123413992
chr12 105138650 105138665 FOXP1 JASPAR yes 123413993
chr12 105138650 105138665 HNF1A JASPAR yes 123413994
chr12 105138651 105138663 FOXC2 JASPAR yes 123413995
chr12 105138651 105138665 ONECUT2 JASPAR yes 123413996
chr12 105138651 105138665 ONECUT3 JASPAR yes 123413997
chr12 105138652 105138663 FOXB1 JASPAR yes 123413998
chr12 105138652 105138663 FOXC1 JASPAR yes 123413999
chr12 105138652 105138663 PROP1 JASPAR yes 123414000
chr12 105138653 105138668 FOXA1 JASPAR yes 123414002
chr12 105138654 105138666 FOXI1 JASPAR yes 123414003
chr12 105138654 105138669 FOXP1 JASPAR yes 123414004
chr12 105138655 105138667 FOXC2 JASPAR yes 123414005
chr12 105138655 105138669 ONECUT2 JASPAR yes 123414006
chr12 105138655 105138669 ONECUT3 JASPAR yes 123414007
chr12 105138656 105138667 FOXB1 JASPAR yes 123414008
chr12 105138656 105138667 FOXC1 JASPAR yes 123414009
chr12 105138659 105138671 MEF2D JASPAR yes 123414011
chr12 105138661 105138665 YY1 TRANSFAC yes 123414012
Genes associated with rs539662919[chr12:105138663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More