EnhancerDB
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  3. rs539669121[chr1:226309954]
Enhancers that have rs539669121[chr1:226309954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226305145 226318791 enh953
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs539669121[chr1:226309954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226306383 226311129 ZNF274 GTRD no Bone Marrow (K562) 21386523
chr1 226307491 226311702 ZNF274 GTRD no Bone Marrow (K562) 21386530
chr1 226307555 226310576 ZNF274 GTRD no Bone Marrow (K562) 21386531
chr1 226307632 226310805 ZNF274 GTRD no Bone Marrow (K562) 21386532
chr1 226307639 226311459 ZNF274 GTRD no Bone Marrow (K562) 21386533
chr1 226308015 226311393 ZNF274 GTRD no Bone Marrow (K562) 21386534
chr1 226308031 226310232 ZNF274 GTRD no Blood (GM12878) 21386535
chr1 226308032 226310067 ZNF274 GTRD no Blood (GM12878) 21386536
chr1 226308084 226311510 ZNF274 GTRD no Cervix (HeLa-S3) 21386538
chr1 226308117 226310049 ZNF274 GTRD no Bone Marrow (K562) 21386540
chr1 226308136 226310804 ZNF274 GTRD no Bone Marrow (K562) 21386541
chr1 226308152 226311061 ZNF274 GTRD no Bone Marrow (K562) 21386542
chr1 226308161 226310591 ZNF274 GTRD no Bone Marrow (K562) 21386543
chr1 226308161 226310753 ZNF274 GTRD no Bone Marrow (K562) 21386544
chr1 226308163 226310809 ZNF274 GTRD no Bone Marrow (K562) 21386545
chr1 226308164 226310022 ZNF274 GTRD no Bone Marrow (K562) 21386546
chr1 226308166 226310117 ZNF274 GTRD no Blood (GM12878) 21386547
chr1 226308172 226310459 ZNF274 GTRD no Bone Marrow (K562) 21386550
chr1 226308174 226310066 ZNF274 GTRD no Bone Marrow (K562) 21386552
chr1 226308174 226310417 ZNF143 GTRD no Epithelial (MCF-7) 21386553
chr1 226308191 226310085 ZNF274 GTRD no Blood (GM12878) 21386556
chr1 226308195 226310041 ZNF274 GTRD no Bone Marrow (K562) 21386558
chr1 226308195 226310187 STAT3 GTRD no Blood (OCI-LY7) 21386559
chr1 226308196 226310940 ZNF274 GTRD no Bone Marrow (K562) 21386560
chr1 226308199 226310047 ZNF143 GTRD no Epithelial (MCF-7) 21386561
chr1 226308212 226310071 ZNF143 GTRD no Epithelial (MCF-7) 21386562
chr1 226308217 226310710 ZNF274 GTRD no Cervix (HeLa-S3) 21386563
chr1 226308227 226310038 ZNF274 GTRD no Bone Marrow (K562) 21386566
chr1 226308228 226309969 ZNF143 GTRD no Epithelial (MCF-7) 21386567
chr1 226308229 226309994 ZNF274 GTRD no Cervix (HeLa-S3) 21386568
chr1 226308230 226310136 ZNF143 GTRD no Epithelial (MCF-7) 21386570
chr1 226308233 226309974 ZNF274 GTRD no Bone Marrow (K562) 21386571
chr1 226308253 226310067 ZNF274 GTRD no Bone Marrow (K562) 21386574
chr1 226308257 226310363 ZNF274 GTRD no Bone Marrow (K562) 21386578
chr1 226308289 226310622 ZNF274 GTRD no Bone Marrow (K562) 21386582
chr1 226308294 226310607 ZNF274 GTRD no Bone Marrow (K562) 21386583
chr1 226308300 226310009 ZNF274 GTRD no Bone Marrow (K562) 21386587
chr1 226308303 226310016 ZNF274 GTRD no Bone Marrow (K562) 21386588
chr1 226308356 226310108 TCF7L2 GTRD no Colon (HCT116) 21386596
chr1 226308363 226310064 ZNF274 GTRD no Bone Marrow (K562) 21386600
chr1 226308369 226310490 ZNF274 GTRD no Bone Marrow (K562) 21386604
chr1 226308370 226310031 ZNF274 GTRD no Blood (GM12878) 21386605
chr1 226308387 226310072 ZNF143 GTRD no Epithelial (MCF-7) 21386608
chr1 226308390 226309957 TCF7L2 GTRD no Colon (HCT116) 21386609
chr1 226308400 226310812 ZNF274 GTRD no Bone Marrow (K562) 21386612
chr1 226308408 226310057 TCF7L2 GTRD no Colon (HCT116) 21386614
chr1 226308433 226310010 ZNF143 GTRD no Epithelial (MCF-7) 21386619
chr1 226308447 226309963 ZNF274 GTRD no Cervix (HeLa-S3) 21386621
chr1 226308454 226310055 ZNF274 GTRD no Bone Marrow (K562) 21386622
chr1 226308458 226310058 TCF7L2 GTRD no Colon (HCT116) 21386623
chr1 226308461 226311099 ZNF274 GTRD no Bone Marrow (K562) 21386624
chr1 226308491 226310514 ZNF274 GTRD no Bone Marrow (K562) 21386629
chr1 226308601 226310358 ZNF274 GTRD no Bone Marrow (K562) 21386644
chr1 226308670 226311087 ZNF274 GTRD no Bone Marrow (K562) 21386649
chr1 226308812 226311069 ZNF274 GTRD no Bone Marrow (K562) 21386670
chr1 226308886 226310451 ZNF274 GTRD no Bone Marrow (K562) 21386677
chr1 226308898 226310458 ZNF274 GTRD no Bone Marrow (K562) 21386679
chr1 226308898 226310628 ZNF274 GTRD no Bone Marrow (K562) 21386680
chr1 226308963 226309958 ZNF274 GTRD no Bone Marrow (K562) 21386689
chr1 226309114 226310032 ZNF274 GTRD no Bone Marrow (K562) 21386711
chr1 226309121 226310117 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386712
chr1 226309248 226310569 ZNF274 GTRD no Bone Marrow (K562) 21386754
chr1 226309249 226311151 ZNF274 GTRD no Bone Marrow (K562) 21386755
chr1 226309313 226310017 ZNF274 GTRD no Bone Marrow (K562) 21386767
chr1 226309444 226311533 ZNF274 GTRD no Bone Marrow (K562) 21386781
chr1 226309450 226310120 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386782
chr1 226309554 226309959 ZNF143 GTRD no Epithelial (MCF-7) 21386786
chr1 226309560 226310323 ZNF274 GTRD no Cervix (HeLa-S3) 21386787
chr1 226309632 226310008 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21386788
chr1 226309633 226309969 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386789
chr1 226309633 226310266 ZNF274 GTRD no Cervix (HeLa-S3) 21386790
chr1 226309638 226310184 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21386791
chr1 226309650 226310026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386792
chr1 226309664 226310060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21386793
chr1 226309672 226310028 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21386794
chr1 226309675 226310020 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21386795
chr1 226309683 226310269 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386796
chr1 226309687 226310017 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386797
chr1 226309690 226310209 ZNF274 GTRD no Cervix (HeLa-S3) 21386798
chr1 226309696 226309957 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21386799
chr1 226309697 226310116 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386800
chr1 226309697 226310378 ZNF274 GTRD no Bone Marrow (K562) 21386801
chr1 226309700 226309987 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21386802
chr1 226309701 226310157 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386803
chr1 226309711 226310027 ZNF274 GTRD no Bone Marrow (K562) 21386805
chr1 226309728 226309956 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386806
chr1 226309802 226310569 ZNF274 GTRD no Bone Marrow (K562) 21386807
chr1 226309825 226310065 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21386808
chr1 226309851 226310077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386809
chr1 226309875 226310275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21386810
chr1 226309933 226310549 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21386811
chr1 226309951 226309959 WT1 TRANSFAC yes 35792937
chr1 226309952 226309973 ZNF263 JASPAR yes 35792938
Genes associated with rs539669121[chr1:226309954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More