EnhancerDB
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  3. rs539670230[chr5:171880239]
Enhancers that have rs539670230[chr5:171880239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr5 171879589 171880295 vista50149
VISTA
Transcript factors that have rs539670230[chr5:171880239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171880113 171880757 CTCF UCSC Txn Factor no Conserved 108537467
chr5 171880227 171880248 ZNF263 JASPAR yes 67792103
chr5 171880227 171880248 ZNF263 JASPAR yes 70761890
chr5 171880228 171880239 E2F6 JASPAR yes 67792104
chr5 171880228 171880239 E2F6 JASPAR yes 70761891
chr5 171880230 171880251 ZNF263 JASPAR yes 67792105
chr5 171880230 171880251 ZNF263 JASPAR yes 70761892
chr5 171880232 171880243 E2F6 JASPAR yes 67792106
chr5 171880232 171880243 E2F6 JASPAR yes 70761893
chr5 171880232 171880253 ZNF263 JASPAR yes 67792107
chr5 171880232 171880253 ZNF263 JASPAR yes 70761894
chr5 171880233 171880254 ZNF263 JASPAR yes 67792108
chr5 171880233 171880254 ZNF263 JASPAR yes 70761895
chr5 171880236 171880257 ZNF263 JASPAR yes 67792109
chr5 171880236 171880257 ZNF263 JASPAR yes 70761896
chr5 171880238 171880252 SPIC JASPAR yes 67792110
chr5 171880238 171880252 SPIC JASPAR yes 70761897
Genes associated with rs539670230[chr5:171880239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More