EnhancerDB
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  3. rs539703963[chr17:70361086]
Enhancers that have rs539703963[chr17:70361086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539703963[chr17:70361086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70360702 70361397 ZNF143 GTRD no Epithelial (MCF-7) 21784289
chr17 70361073 70361088 FOXA1 JASPAR yes 55778115
chr17 70361076 70361087 FOXB1 JASPAR yes 55778116
chr17 70361076 70361087 FOXC1 JASPAR yes 55778117
chr17 70361081 70361097 SOX8 JASPAR yes 55778118
Genes associated with rs539703963[chr17:70361086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More