EnhancerDB
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  3. rs539716252[chr1:56172341]
Enhancers that have rs539716252[chr1:56172341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56157817 56177115 enh11885
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs539716252[chr1:56172341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56172327 56172341 TCF7L2 JASPAR yes 29064377
chr1 56172334 56172349 FOXP1 JASPAR yes 29064378
chr1 56172340 56172346 TBP TRANSFAC yes 29064379
Genes associated with rs539716252[chr1:56172341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More