EnhancerDB
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  3. rs539721299[chr1:172351429]
Enhancers that have rs539721299[chr1:172351429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172350165 172355002 enh12371
Astrocyte Placenta Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs539721299[chr1:172351429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172350543 172353610 ZNF274 GTRD no Cervix (HeLa-S3) 107845678
chr1 172350656 172353095 ZBTB33 GTRD no Lung (A549) 107845679
chr1 172350659 172353094 TCF7L2 GTRD no Colon (HCT116) 107845680
chr1 172350660 172353273 ZBTB33 GTRD no Lung (A549) 107845681
chr1 172350685 172353233 ZBTB33 GTRD no Lung (A549) 107845682
chr1 172350743 172352858 ZNF274 GTRD no Cervix (HeLa-S3) 107845683
chr1 172350801 172352897 ZNF274 GTRD no Cervix (HeLa-S3) 107845684
chr1 172350882 172352858 ZNF274 GTRD no Cervix (HeLa-S3) 107845685
chr1 172350886 172353046 ZNF274 GTRD no Cervix (HeLa-S3) 107845686
chr1 172350893 172352872 ZBTB33 GTRD no Lung (A549) 107845687
chr1 172350896 172353524 ZNF274 GTRD no Cervix (HeLa-S3) 107845688
chr1 172350944 172352912 ZBTB33 GTRD no Brain (SK-N-SH) 107845689
chr1 172351182 172352988 ZBTB33 GTRD no Brain (SK-N-SH) 107845690
chr1 172351223 172353673 ZBTB33 GTRD no Brain (SK-N-SH) 107845691
chr1 172351308 172352829 ZNF274 GTRD no Cervix (HeLa-S3) 107845692
chr1 172351339 172353469 ZNF274 GTRD no Cervix (HeLa-S3) 107845693
chr1 172351359 172352706 ZBTB33 GTRD no Brain (SK-N-SH) 107845694
chr1 172351381 172352837 ZBTB33 GTRD no Brain (SK-N-SH) 107845695
chr1 172351413 172352774 ZBTB33 GTRD no Brain (SK-N-SH) 107845696
chr1 172351418 172351438 RREB1 JASPAR yes 33126728
Genes associated with rs539721299[chr1:172351429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More