EnhancerDB
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  3. rs539722885[chr1:40458943]
Enhancers that have rs539722885[chr1:40458943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs539722885[chr1:40458943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40458925 40458946 IRF1 JASPAR yes 28306338
chr1 40458925 40458946 ZNF263 JASPAR yes 28306339
chr1 40458927 40458948 IRF1 JASPAR yes 28306340
chr1 40458929 40458950 IRF1 JASPAR yes 28306341
chr1 40458933 40458954 IRF1 JASPAR yes 28306342
chr1 40458935 40458950 PRDM1 JASPAR yes 28306343
chr1 40458935 40458950 STAT2 JASPAR yes 28306344
chr1 40458936 40458950 SPIC JASPAR yes 28306345
chr1 40458936 40458950 STAT1 JASPAR yes 28306346
chr1 40458937 40458958 IRF1 JASPAR yes 28306347
chr1 40458938 40458953 FOXP1 JASPAR yes 28306348
chr1 40458938 40458959 IRF1 JASPAR yes 28306349
chr1 40458940 40458955 FOXP1 JASPAR yes 28306350
chr1 40458942 40458957 FOXP1 JASPAR yes 28306351
chr1 40458943 40458958 FOXP1 JASPAR yes 28306352
Genes associated with rs539722885[chr1:40458943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More