EnhancerDB
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  3. rs539726887[chr1:201564279]
Enhancers that have rs539726887[chr1:201564279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs539726887[chr1:201564279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201563059 201564428 ZNF143 GTRD no Epithelial (MCF-7) 21365131
chr1 201564270 201564291 REST JASPAR yes 34511070
Genes associated with rs539726887[chr1:201564279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More