EnhancerDB
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  3. rs539735906[chr2:219168297]
Enhancers that have rs539735906[chr2:219168297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 219159703 219168321 enh19239
Liver (HepG2) Prostate (RWPE1) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs539735906[chr2:219168297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 219168288 219168309 IRF1 JASPAR yes 80996938
chr2 219168291 219168305 SPI1 JASPAR yes 80996939
chr2 219168291 219168312 IRF1 JASPAR yes 80996940
chr2 219168292 219168313 IRF1 JASPAR yes 80996941
chr2 219168293 219168314 IRF1 JASPAR yes 80996942
chr2 219168294 219168309 FOXP1 JASPAR yes 80996943
chr2 219168294 219168315 IRF1 JASPAR yes 80996944
chr2 219168295 219168316 IRF1 JASPAR yes 80996945
chr2 219168296 219168311 FOXP1 JASPAR yes 80996946
chr2 219168296 219168317 IRF1 JASPAR yes 80996947
chr2 219168297 219168312 FOXP1 JASPAR yes 80996948
chr2 219168297 219168318 IRF1 JASPAR yes 80996949
Genes associated with rs539735906[chr2:219168297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More