EnhancerDB
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  3. rs539780341[chr6:41508322]
Enhancers that have rs539780341[chr6:41508322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41483885 41508635 enh38996
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Thyroid Breast Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs539780341[chr6:41508322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41508317 41508332 MEF2C JASPAR yes 101656788
chr6 41508320 41508335 FOXP1 JASPAR yes 101656789
chr6 41508321 41508336 FOXP1 JASPAR yes 101656790
chr6 41508321 41508342 IRF1 JASPAR yes 101656791
chr6 41508322 41508337 FOXP1 JASPAR yes 101656792
chr6 41508322 41508343 IRF1 JASPAR yes 101656793
Genes associated with rs539780341[chr6:41508322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More