EnhancerDB
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  3. rs539784028[chr17:53648397]
Enhancers that have rs539784028[chr17:53648397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs539784028[chr17:53648397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53648385 53648398 DUXA JASPAR yes 54860142
chr17 53648386 53648397 DUX4 JASPAR yes 54860143
chr17 53648390 53648398 RHOXF1 JASPAR yes 54860144
chr17 53648390 53648399 PITX3 JASPAR yes 54860145
chr17 53648396 53648408 FOXC2 JASPAR yes 54860146
Genes associated with rs539784028[chr17:53648397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More