EnhancerDB
  1. Home
  2. SNP
  3. rs539798827[chr2:201627319]
Enhancers that have rs539798827[chr2:201627319]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201603725 201634495 enh19115
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Thymus Heart
Transcript factors that have rs539798827[chr2:201627319]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201627307 201627319 IRF1 JASPAR yes 80125605
chr2 201627313 201627328 RUNX2 JASPAR yes 80125606
chr2 201627314 201627323 RUNX2 JASPAR yes 80125607
Genes associated with rs539798827[chr2:201627319], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More